PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P09730_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family TCP
Protein Properties Length: 404aa    MW: 40670.8 Da    PI: 11.1277
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P09730_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP35.72.9e-11145174231
                     TCP   2 agkkdrhskihTkvggRdRRvRlsaecaar 31 
                             a++k++++++hTkv+gR+RR+R++a caar
  GSMUA_Achr10P09730_001 145 APAKRSSKDRHTKVDGRGRRIRMPAICAAR 174
                             789*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.4E-7150174IPR005333Transcription factor, TCP
PfamPF036347.9E-5174232IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MEQSELSRHG GQGGGGAGTG GGGGGGGRGG RVRANSNSSS GTSSSRSTSE HHQPQHHFGH  60
HHHQQQKQQG NSSIPSSLEL VPLKNRAGPS SVAPFMGSIV HHGVVDASLA ISTAKPDPSL  120
SPGAVGPSSS SAAADTSKKL AGGGAPAKRS SKDRHTKVDG RGRRIRMPAI CAARQAEPAI  180
IATTGTGTIP ANFSTLNISL RSSGSSLSAP PSKSAPLSFH ALALAHHRPD FEQVTDPGMS  240
HAAAMLGLQG GGSSGGGDSA DTYLRKRFRE DLFKDEQPEG SGGAGPSSPS SASKSMRAGS  300
GLQLHQRSQQ QEAAAAAAAA GGAFWMLPVS TGSAAPAVAA ATGPSEPSIW TFPAMAGQYR  360
PGISGGSSIQ APLQFMSRIN LSGASRTGNV GNQSRDARGP QCIQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009420570.11e-164PREDICTED: transcription factor TCP8-like
TrEMBLM0RGU90.0M0RGU9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P09730_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP49342652
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.22e-11TCP family protein